Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tff3Q62395 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tff3Q62395 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.4□□□□□ -0.1
Tff3Q62395 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tff3Q62395 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tff3Q62395 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff3Q62395 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.4□□□□□ -0.1
Tff3Q62395 Gm7461-201ENSMUST00000058918 827 ntBASIC14.4□□□□□ -0.1
Tff3Q62395 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff3Q62395 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tff3Q62395 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tff3Q62395 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Tff3Q62395 Gm7153-201ENSMUST00000117092 455 ntBASIC14.39□□□□□ -0.11
Tff3Q62395 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Gm29707-201ENSMUST00000196325 491 ntBASIC14.39□□□□□ -0.11
Tff3Q62395 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.39□□□□□ -0.11
Tff3Q62395 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.39□□□□□ -0.11
Tff3Q62395 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff3Q62395 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tff3Q62395 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tff3Q62395 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tff3Q62395 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.38□□□□□ -0.11
Tff3Q62395 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.38□□□□□ -0.11
Tff3Q62395 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff3Q62395 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Tff3Q62395 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tff3Q62395 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tff3Q62395 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tff3Q62395 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tff3Q62395 Gm24589-201ENSMUST00000116692 94 ntBASIC14.37□□□□□ -0.11
Tff3Q62395 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms