Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Sim2Q61079 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.23■□□□□ 0.19
Sim2Q61079 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim2Q61079 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sim2Q61079 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.23■□□□□ 0.19
Sim2Q61079 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Gm14822-201ENSMUST00000122247 291 ntBASIC16.22■□□□□ 0.19
Sim2Q61079 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.22■□□□□ 0.19
Sim2Q61079 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.22■□□□□ 0.19
Sim2Q61079 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Sim2Q61079 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sim2Q61079 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sim2Q61079 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sim2Q61079 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.21■□□□□ 0.19
Sim2Q61079 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Sim2Q61079 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.21■□□□□ 0.19
Sim2Q61079 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.21■□□□□ 0.19
Sim2Q61079 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Gm25990-201ENSMUST00000102440 86 ntBASIC16.21■□□□□ 0.19
Sim2Q61079 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.21■□□□□ 0.19
Sim2Q61079 Gm14494-201ENSMUST00000118786 435 ntBASIC16.21■□□□□ 0.19
Sim2Q61079 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Sim2Q61079 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sim2Q61079 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sim2Q61079 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sim2Q61079 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sim2Q61079 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sim2Q61079 Gm13418-201ENSMUST00000119097 944 ntBASIC16.2■□□□□ 0.18
Sim2Q61079 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.2■□□□□ 0.18
Sim2Q61079 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.2■□□□□ 0.18
Sim2Q61079 Gm25745-201ENSMUST00000174945 133 ntBASIC16.2■□□□□ 0.18
Sim2Q61079 Gm4535-201ENSMUST00000182274 558 ntBASIC16.2■□□□□ 0.18
Sim2Q61079 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.2■□□□□ 0.18
Sim2Q61079 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sim2Q61079 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Gm10355-201ENSMUST00000097146 517 ntBASIC16.2■□□□□ 0.18
Sim2Q61079 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sim2Q61079 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sim2Q61079 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim2Q61079 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sim2Q61079 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.19■□□□□ 0.18
Sim2Q61079 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim2Q61079 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sim2Q61079 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms