Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a4Q60857 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc6a4Q60857 Gm11841-201ENSMUST00000117060 1963 ntBASIC17■□□□□ 0.31
Slc6a4Q60857 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc6a4Q60857 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17■□□□□ 0.31
Slc6a4Q60857 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17■□□□□ 0.31
Slc6a4Q60857 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Slc6a4Q60857 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc6a4Q60857 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Gm15442-201ENSMUST00000117905 1527 ntBASIC17■□□□□ 0.31
Slc6a4Q60857 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a4Q60857 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Gm27741-201ENSMUST00000185060 237 ntBASIC16.99■□□□□ 0.31
Slc6a4Q60857 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a4Q60857 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.98■□□□□ 0.31
Slc6a4Q60857 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.98■□□□□ 0.31
Slc6a4Q60857 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a4Q60857 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.97■□□□□ 0.31
Slc6a4Q60857 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc6a4Q60857 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a4Q60857 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a4Q60857 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms