Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trp53rkaQ5U452 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trp53rkaQ5U452 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trp53rkaQ5U452 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trp53rkaQ5U452 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trp53rkaQ5U452 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Gm42778-201ENSMUST00000199644 553 ntBASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trp53rkaQ5U452 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trp53rkaQ5U452 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms