Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85aQ5SP85 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85aQ5SP85 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85aQ5SP85 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85aQ5SP85 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ccdc85aQ5SP85 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85aQ5SP85 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85aQ5SP85 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Gm13418-201ENSMUST00000119097 944 ntBASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Gm7506-201ENSMUST00000207758 815 ntBASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85aQ5SP85 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85aQ5SP85 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc85aQ5SP85 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Gm25990-201ENSMUST00000102440 86 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms