Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5d-4Q5R1F6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5d-4Q5R1F6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Gm37055-201ENSMUST00000191866 133 ntBASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Gm30025-201ENSMUST00000218555 728 ntBASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5d-4Q5R1F6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms