Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col27a1Q5QNQ9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col27a1Q5QNQ9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Mir7023-201ENSMUST00000185093 64 ntBASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col27a1Q5QNQ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col27a1Q5QNQ9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Gm25948-201ENSMUST00000175334 112 ntBASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col27a1Q5QNQ9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm11424-201ENSMUST00000121929 829 ntBASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm45612-201ENSMUST00000211320 160 ntBASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col27a1Q5QNQ9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Gm12428-201ENSMUST00000119844 727 ntBASIC15.97■□□□□ 0.15
Col27a1Q5QNQ9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms