Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Gm7862-201ENSMUST00000121461 292 ntBASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf43Q5NCP0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.89■□□□□ 0.3
Rnf43Q5NCP0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf43Q5NCP0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rnf43Q5NCP0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Gm37935-201ENSMUST00000192012 982 ntBASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf43Q5NCP0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm6296-201ENSMUST00000222599 943 ntBASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.88■□□□□ 0.29
Rnf43Q5NCP0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rnf43Q5NCP0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Gm15165-201ENSMUST00000118140 502 ntBASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms