Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Gm37025-201ENSMUST00000195159 829 ntBASIC16.47■□□□□ 0.23
Scn2bQ56A07 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.47■□□□□ 0.23
Scn2bQ56A07 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.47■□□□□ 0.23
Scn2bQ56A07 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2bQ56A07 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn2bQ56A07 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Timm23-208ENSMUST00000226683 750 ntBASIC16.46■□□□□ 0.23
Scn2bQ56A07 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2bQ56A07 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2bQ56A07 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2bQ56A07 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2bQ56A07 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2bQ56A07 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2bQ56A07 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Mir5122-201ENSMUST00000175004 89 ntBASIC16.44■□□□□ 0.22
Scn2bQ56A07 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Gm37055-201ENSMUST00000191866 133 ntBASIC16.44■□□□□ 0.22
Scn2bQ56A07 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms