Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf38aQ4FK66 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf38aQ4FK66 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf38aQ4FK66 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Gm13312-201ENSMUST00000119631 718 ntBASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38aQ4FK66 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Gm15372-201ENSMUST00000120729 834 ntBASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Prpf38aQ4FK66 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf38aQ4FK66 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38aQ4FK66 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms