Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Gm11539-201ENSMUST00000119837 557 ntBASIC18.94■□□□□ 0.62
Gm28047Q3US59 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Gm28047Q3US59 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Gm7370-201ENSMUST00000219471 767 ntBASIC18.94■□□□□ 0.62
Gm28047Q3US59 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28047Q3US59 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.93■□□□□ 0.62
Gm28047Q3US59 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Actl10-202ENSMUST00000226583 1501 ntBASIC18.93■□□□□ 0.62
Gm28047Q3US59 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28047Q3US59 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Phf7-203ENSMUST00000226565 1971 ntBASIC18.92■□□□□ 0.62
Gm28047Q3US59 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm28047Q3US59 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.91■□□□□ 0.62
Gm28047Q3US59 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Gm30025-201ENSMUST00000218555 728 ntBASIC18.91■□□□□ 0.62
Gm28047Q3US59 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28047Q3US59 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28047Q3US59 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.89■□□□□ 0.62
Gm28047Q3US59 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm28047Q3US59 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Gm37055-201ENSMUST00000191866 133 ntBASIC18.89■□□□□ 0.61
Gm28047Q3US59 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.89■□□□□ 0.61
Gm28047Q3US59 Gm18115-201ENSMUST00000221209 621 ntBASIC18.89■□□□□ 0.61
Gm28047Q3US59 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.89■□□□□ 0.61
Gm28047Q3US59 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.89■□□□□ 0.61
Gm28047Q3US59 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms