Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Gm44771-201ENSMUST00000206975 626 ntBASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Lins1Q3U1D0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lins1Q3U1D0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Mzt1-203ENSMUST00000227948 952 ntBASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lins1Q3U1D0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lins1Q3U1D0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lins1Q3U1D0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Gm28659-201ENSMUST00000188013 759 ntBASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lins1Q3U1D0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms