Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Gm26039-201ENSMUST00000158152 144 ntBASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Khdc4Q3TCX3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Gm10566-201ENSMUST00000086739 996 ntBASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Khdc4Q3TCX3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Khdc4Q3TCX3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Gm17807-201ENSMUST00000186869 298 ntBASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Khdc4Q3TCX3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.79■□□□□ 0.12
Khdc4Q3TCX3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms