Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nhej1Q3KNJ2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nhej1Q3KNJ2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nhej1Q3KNJ2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nhej1Q3KNJ2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms