Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.85□□□□□ -0.03
Chd8Q09XV5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.84□□□□□ -0.03
Chd8Q09XV5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gm15824-201ENSMUST00000119516 955 ntBASIC14.84□□□□□ -0.03
Chd8Q09XV5 Mir8102-201ENSMUST00000184148 139 ntBASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gm45331-201ENSMUST00000209868 554 ntBASIC14.84□□□□□ -0.03
Chd8Q09XV5 Thap2-203ENSMUST00000218989 527 ntBASIC14.84□□□□□ -0.03
Chd8Q09XV5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd8Q09XV5 Gm12151-201ENSMUST00000121374 290 ntBASIC14.83□□□□□ -0.03
Chd8Q09XV5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Chd8Q09XV5 Gm8825-201ENSMUST00000182565 998 ntBASIC14.83□□□□□ -0.03
Chd8Q09XV5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd8Q09XV5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Gm15427-201ENSMUST00000117288 531 ntBASIC14.83□□□□□ -0.04
Chd8Q09XV5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.83□□□□□ -0.04
Chd8Q09XV5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd8Q09XV5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Gm7488-201ENSMUST00000117148 684 ntBASIC14.82□□□□□ -0.04
Chd8Q09XV5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.82□□□□□ -0.04
Chd8Q09XV5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.82□□□□□ -0.04
Chd8Q09XV5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Gm17837-201ENSMUST00000186435 985 ntBASIC14.82□□□□□ -0.04
Chd8Q09XV5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd8Q09XV5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.81□□□□□ -0.04
Chd8Q09XV5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.81□□□□□ -0.04
Chd8Q09XV5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gm18421-201ENSMUST00000204122 625 ntBASIC14.81□□□□□ -0.04
Chd8Q09XV5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd8Q09XV5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms