Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pkp1P97350 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pkp1P97350 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pkp1P97350 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.46■□□□□ 0.71
Pkp1P97350 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.46■□□□□ 0.71
Pkp1P97350 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pkp1P97350 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.46■□□□□ 0.71
Pkp1P97350 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.46■□□□□ 0.71
Pkp1P97350 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Pkp1P97350 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pkp1P97350 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.45■□□□□ 0.7
Pkp1P97350 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pkp1P97350 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp1P97350 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp1P97350 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp1P97350 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Pkp1P97350 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp1P97350 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp1P97350 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.44■□□□□ 0.7
Pkp1P97350 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp1P97350 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp1P97350 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pkp1P97350 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Gm13474-201ENSMUST00000122466 815 ntBASIC19.43■□□□□ 0.7
Pkp1P97350 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pkp1P97350 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Mir5130-201ENSMUST00000175160 84 ntBASIC19.43■□□□□ 0.7
Pkp1P97350 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pkp1P97350 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp1P97350 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pkp1P97350 Gm45058-201ENSMUST00000205810 766 ntBASIC19.42■□□□□ 0.7
Pkp1P97350 Gm18115-201ENSMUST00000221209 621 ntBASIC19.42■□□□□ 0.7
Pkp1P97350 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.42■□□□□ 0.7
Pkp1P97350 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.42■□□□□ 0.7
Pkp1P97350 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp1P97350 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pkp1P97350 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.41■□□□□ 0.7
Pkp1P97350 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pkp1P97350 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pkp1P97350 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms