Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim43cP86449 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim43cP86449 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim43cP86449 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim43cP86449 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim43cP86449 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim43cP86449 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim43cP86449 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.08■□□□□ 0.48
Trim43cP86449 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim43cP86449 Gm22697-201ENSMUST00000175194 63 ntBASIC18.08■□□□□ 0.48
Trim43cP86449 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trim43cP86449 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.08■□□□□ 0.48
Trim43cP86449 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.08■□□□□ 0.48
Trim43cP86449 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim43cP86449 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim43cP86449 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trim43cP86449 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim43cP86449 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim43cP86449 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim43cP86449 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim43cP86449 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim43cP86449 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim43cP86449 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim43cP86449 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim43cP86449 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.06■□□□□ 0.48
Trim43cP86449 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Trim43cP86449 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.06■□□□□ 0.48
Trim43cP86449 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trim43cP86449 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim43cP86449 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Trim43cP86449 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim43cP86449 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Trim43cP86449 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim43cP86449 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Gm29707-201ENSMUST00000196325 491 ntBASIC18.05■□□□□ 0.48
Trim43cP86449 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms