Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ThraP63058 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ThraP63058 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
ThraP63058 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Gm33142-201ENSMUST00000193913 867 ntBASIC16.83■□□□□ 0.28
ThraP63058 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.83■□□□□ 0.28
ThraP63058 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ThraP63058 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ThraP63058 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.82■□□□□ 0.28
ThraP63058 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ThraP63058 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ThraP63058 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ThraP63058 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ThraP63058 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ThraP63058 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ThraP63058 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ThraP63058 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.81■□□□□ 0.28
ThraP63058 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ThraP63058 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.81■□□□□ 0.28
ThraP63058 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
ThraP63058 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ThraP63058 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ThraP63058 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.8■□□□□ 0.28
ThraP63058 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ThraP63058 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
ThraP63058 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ThraP63058 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ThraP63058 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ThraP63058 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ThraP63058 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ThraP63058 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.79■□□□□ 0.28
ThraP63058 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ThraP63058 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Dancr-204ENSMUST00000132389 2347 ntBASIC16.79■□□□□ 0.28
ThraP63058 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms