Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17■□□□□ 0.31
Ybx1P62960 Gm45244-201ENSMUST00000211328 2200 ntBASIC17■□□□□ 0.31
Ybx1P62960 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ybx1P62960 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17■□□□□ 0.31
Ybx1P62960 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17■□□□□ 0.31
Ybx1P62960 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17■□□□□ 0.31
Ybx1P62960 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17■□□□□ 0.31
Ybx1P62960 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 AC160338.1-201ENSMUST00000214232 705 ntBASIC17■□□□□ 0.31
Ybx1P62960 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ybx1P62960 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17■□□□□ 0.31
Ybx1P62960 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ybx1P62960 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.99■□□□□ 0.31
Ybx1P62960 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.99■□□□□ 0.31
Ybx1P62960 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ybx1P62960 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ybx1P62960 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.99■□□□□ 0.31
Ybx1P62960 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.99■□□□□ 0.31
Ybx1P62960 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.98■□□□□ 0.31
Ybx1P62960 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ybx1P62960 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.98■□□□□ 0.31
Ybx1P62960 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.98■□□□□ 0.31
Ybx1P62960 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.98■□□□□ 0.31
Ybx1P62960 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.98■□□□□ 0.31
Ybx1P62960 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.98■□□□□ 0.31
Ybx1P62960 Gm6296-201ENSMUST00000222599 943 ntBASIC16.98■□□□□ 0.31
Ybx1P62960 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ybx1P62960 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ybx1P62960 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.98■□□□□ 0.31
Ybx1P62960 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ybx1P62960 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.97■□□□□ 0.31
Ybx1P62960 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.97■□□□□ 0.31
Ybx1P62960 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.97■□□□□ 0.31
Ybx1P62960 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.97■□□□□ 0.31
Ybx1P62960 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.97■□□□□ 0.31
Ybx1P62960 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ybx1P62960 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ybx1P62960 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ybx1P62960 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms