Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrch1P62046 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Lrch1P62046 Gm8097-201ENSMUST00000117903 829 ntBASIC19.58■□□□□ 0.72
Lrch1P62046 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Lrch1P62046 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Lrch1P62046 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.58■□□□□ 0.72
Lrch1P62046 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrch1P62046 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrch1P62046 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.58■□□□□ 0.72
Lrch1P62046 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrch1P62046 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Lrch1P62046 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrch1P62046 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrch1P62046 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.57■□□□□ 0.72
Lrch1P62046 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lrch1P62046 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.57■□□□□ 0.72
Lrch1P62046 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Lrch1P62046 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lrch1P62046 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrch1P62046 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lrch1P62046 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Lrch1P62046 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.56■□□□□ 0.72
Lrch1P62046 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lrch1P62046 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.56■□□□□ 0.72
Lrch1P62046 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrch1P62046 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lrch1P62046 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Lrch1P62046 Gm4459-201ENSMUST00000118750 468 ntBASIC19.55■□□□□ 0.72
Lrch1P62046 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.55■□□□□ 0.72
Lrch1P62046 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lrch1P62046 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lrch1P62046 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrch1P62046 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.54■□□□□ 0.72
Lrch1P62046 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lrch1P62046 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.54■□□□□ 0.72
Lrch1P62046 Gm7222-201ENSMUST00000117512 906 ntBASIC19.54■□□□□ 0.72
Lrch1P62046 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.54■□□□□ 0.72
Lrch1P62046 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.54■□□□□ 0.72
Lrch1P62046 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lrch1P62046 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrch1P62046 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Gm14057-201ENSMUST00000120631 482 ntBASIC19.53■□□□□ 0.72
Lrch1P62046 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.53■□□□□ 0.72
Lrch1P62046 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.53■□□□□ 0.72
Lrch1P62046 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lrch1P62046 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrch1P62046 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lrch1P62046 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lrch1P62046 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Lrch1P62046 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Lrch1P62046 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.52■□□□□ 0.72
Lrch1P62046 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lrch1P62046 Mir3113-201ENSMUST00000175478 76 ntBASIC19.52■□□□□ 0.72
Lrch1P62046 Mir8117-201ENSMUST00000184773 107 ntBASIC19.52■□□□□ 0.72
Lrch1P62046 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms