Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.79□□□□□ -0.04
Sf3b6P59708 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.78□□□□□ -0.04
Sf3b6P59708 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.78□□□□□ -0.04
Sf3b6P59708 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b6P59708 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b6P59708 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b6P59708 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b6P59708 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.77□□□□□ -0.04
Sf3b6P59708 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b6P59708 Gm27011-201ENSMUST00000182352 972 ntBASIC14.77□□□□□ -0.05
Sf3b6P59708 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.77□□□□□ -0.05
Sf3b6P59708 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sf3b6P59708 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b6P59708 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sf3b6P59708 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sf3b6P59708 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.76□□□□□ -0.05
Sf3b6P59708 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sf3b6P59708 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Trmt13-210ENSMUST00000198454 880 ntBASIC14.76□□□□□ -0.05
Sf3b6P59708 Gm4974-201ENSMUST00000209974 875 ntBASIC14.76□□□□□ -0.05
Sf3b6P59708 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Sf3b6P59708 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b6P59708 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.75□□□□□ -0.05
Sf3b6P59708 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sf3b6P59708 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sf3b6P59708 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Gm10653-202ENSMUST00000139570 835 ntBASIC14.75□□□□□ -0.05
Sf3b6P59708 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.75□□□□□ -0.05
Sf3b6P59708 Gm37856-201ENSMUST00000191634 999 ntBASIC14.75□□□□□ -0.05
Sf3b6P59708 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.75□□□□□ -0.05
Sf3b6P59708 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3b6P59708 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms