Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Tm6sf1P58749 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Gm23634-201ENSMUST00000175071 91 ntBASIC20.4■□□□□ 0.86
Tm6sf1P58749 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tm6sf1P58749 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.39■□□□□ 0.86
Tm6sf1P58749 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tm6sf1P58749 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Tm6sf1P58749 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tm6sf1P58749 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tm6sf1P58749 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tm6sf1P58749 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.38■□□□□ 0.85
Tm6sf1P58749 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tm6sf1P58749 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tm6sf1P58749 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tm6sf1P58749 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms