Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Irf5P56477 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Irf5P56477 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Irf5P56477 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.66■□□□□ 0.74
Irf5P56477 Gm37722-201ENSMUST00000193757 208 ntBASIC19.66■□□□□ 0.74
Irf5P56477 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Gm34391-201ENSMUST00000203706 907 ntBASIC19.66■□□□□ 0.74
Irf5P56477 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Irf5P56477 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.66■□□□□ 0.74
Irf5P56477 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.66■□□□□ 0.74
Irf5P56477 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf5P56477 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.65■□□□□ 0.74
Irf5P56477 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.65■□□□□ 0.74
Irf5P56477 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.65■□□□□ 0.74
Irf5P56477 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Gm10566-201ENSMUST00000086739 996 ntBASIC19.65■□□□□ 0.74
Irf5P56477 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Irf5P56477 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf5P56477 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Irf5P56477 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Irf5P56477 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.64■□□□□ 0.73
Irf5P56477 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.64■□□□□ 0.73
Irf5P56477 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf5P56477 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Irf5P56477 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Irf5P56477 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.64■□□□□ 0.73
Irf5P56477 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf5P56477 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Mir770-201ENSMUST00000103252 94 ntBASIC19.63■□□□□ 0.73
Irf5P56477 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Irf5P56477 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.63■□□□□ 0.73
Irf5P56477 Birc2-201ENSMUST00000054878 378 ntBASIC19.63■□□□□ 0.73
Irf5P56477 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf5P56477 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Irf5P56477 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Irf5P56477 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Irf5P56477 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.62■□□□□ 0.73
Irf5P56477 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf5P56477 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf5P56477 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf5P56477 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf5P56477 Gm5867-201ENSMUST00000063197 592 ntBASIC19.62■□□□□ 0.73
Irf5P56477 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Irf5P56477 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Irf5P56477 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.62■□□□□ 0.73
Irf5P56477 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Irf5P56477 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Irf5P56477 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
Irf5P56477 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Irf5P56477 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC19.61■□□□□ 0.73
Irf5P56477 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.61■□□□□ 0.73
Irf5P56477 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Irf5P56477 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf5P56477 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf5P56477 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Irf5P56477 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Irf5P56477 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf5P56477 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf5P56477 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.6■□□□□ 0.73
Irf5P56477 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms