Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.22■□□□□ 0.35
LmnaP48678 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LmnaP48678 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LmnaP48678 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LmnaP48678 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.21■□□□□ 0.35
LmnaP48678 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.21■□□□□ 0.35
LmnaP48678 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Idnk-204ENSMUST00000226010 1898 ntBASIC17.21■□□□□ 0.35
LmnaP48678 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.21■□□□□ 0.35
LmnaP48678 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.21■□□□□ 0.35
LmnaP48678 Gm7791-201ENSMUST00000219066 539 ntBASIC17.21■□□□□ 0.35
LmnaP48678 Birc2-201ENSMUST00000054878 378 ntBASIC17.21■□□□□ 0.35
LmnaP48678 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LmnaP48678 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LmnaP48678 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LmnaP48678 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
LmnaP48678 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LmnaP48678 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
LmnaP48678 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.2■□□□□ 0.34
LmnaP48678 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LmnaP48678 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LmnaP48678 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.2■□□□□ 0.34
LmnaP48678 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LmnaP48678 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.19■□□□□ 0.34
LmnaP48678 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LmnaP48678 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Gm7213-201ENSMUST00000215977 950 ntBASIC17.19■□□□□ 0.34
LmnaP48678 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LmnaP48678 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LmnaP48678 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.18■□□□□ 0.34
LmnaP48678 Gm7638-201ENSMUST00000121348 967 ntBASIC17.18■□□□□ 0.34
LmnaP48678 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Gm18733-201ENSMUST00000173950 856 ntBASIC17.18■□□□□ 0.34
LmnaP48678 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.18■□□□□ 0.34
LmnaP48678 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.18■□□□□ 0.34
LmnaP48678 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LmnaP48678 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
LmnaP48678 Gm13884-201ENSMUST00000118103 829 ntBASIC17.17■□□□□ 0.34
LmnaP48678 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.17■□□□□ 0.34
LmnaP48678 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LmnaP48678 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LmnaP48678 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LmnaP48678 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LmnaP48678 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LmnaP48678 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms