Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Usp53P15975 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.23■□□□□ 0.67
Usp53P15975 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.23■□□□□ 0.67
Usp53P15975 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp53P15975 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp53P15975 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.22■□□□□ 0.67
Usp53P15975 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.22■□□□□ 0.67
Usp53P15975 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp53P15975 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp53P15975 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Usp53P15975 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp53P15975 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.21■□□□□ 0.67
Usp53P15975 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp53P15975 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp53P15975 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp53P15975 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp53P15975 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp53P15975 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Gm27741-201ENSMUST00000185060 237 ntBASIC19.2■□□□□ 0.66
Usp53P15975 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp53P15975 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp53P15975 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp53P15975 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.19■□□□□ 0.66
Usp53P15975 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp53P15975 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp53P15975 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp53P15975 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Usp53P15975 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp53P15975 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Usp53P15975 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Usp53P15975 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.18■□□□□ 0.66
Usp53P15975 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp53P15975 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp53P15975 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Usp53P15975 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp53P15975 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp53P15975 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.18■□□□□ 0.66
Usp53P15975 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp53P15975 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp53P15975 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp53P15975 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp53P15975 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp53P15975 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp53P15975 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms