Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.95□□□□□ -0.18
Hoxa3P02831 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Hoxa3P02831 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.95□□□□□ -0.18
Hoxa3P02831 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxa3P02831 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxa3P02831 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxa3P02831 Gm27000-201ENSMUST00000182943 842 ntBASIC13.94□□□□□ -0.18
Hoxa3P02831 Gm17808-201ENSMUST00000200859 894 ntBASIC13.94□□□□□ -0.18
Hoxa3P02831 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.94□□□□□ -0.18
Hoxa3P02831 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxa3P02831 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxa3P02831 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxa3P02831 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxa3P02831 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa3P02831 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxa3P02831 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxa3P02831 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxa3P02831 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Gm14859-201ENSMUST00000117752 357 ntBASIC13.92□□□□□ -0.18
Hoxa3P02831 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.92□□□□□ -0.18
Hoxa3P02831 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Gm37722-201ENSMUST00000193757 208 ntBASIC13.92□□□□□ -0.18
Hoxa3P02831 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.92□□□□□ -0.18
Hoxa3P02831 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxa3P02831 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxa3P02831 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.91□□□□□ -0.18
Hoxa3P02831 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Gm27704-201ENSMUST00000185094 107 ntBASIC13.91□□□□□ -0.18
Hoxa3P02831 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms