Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tp53P02340 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Gm18421-201ENSMUST00000204122 625 ntBASIC17.97■□□□□ 0.47
Tp53P02340 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.97■□□□□ 0.47
Tp53P02340 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tp53P02340 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tp53P02340 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Tp53P02340 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tp53P02340 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tp53P02340 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.96■□□□□ 0.47
Tp53P02340 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Tp53P02340 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Tp53P02340 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.95■□□□□ 0.46
Tp53P02340 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.95■□□□□ 0.46
Tp53P02340 Gm29707-201ENSMUST00000196325 491 ntBASIC17.95■□□□□ 0.46
Tp53P02340 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.95■□□□□ 0.46
Tp53P02340 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.95■□□□□ 0.46
Tp53P02340 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Tp53P02340 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tp53P02340 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tp53P02340 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tp53P02340 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Tp53P02340 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.94■□□□□ 0.46
Tp53P02340 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.94■□□□□ 0.46
Tp53P02340 Gm22697-201ENSMUST00000175194 63 ntBASIC17.94■□□□□ 0.46
Tp53P02340 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.94■□□□□ 0.46
Tp53P02340 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tp53P02340 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tp53P02340 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.93■□□□□ 0.46
Tp53P02340 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tp53P02340 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tp53P02340 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms