Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Setdb1O88974 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Setdb1O88974 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Setdb1O88974 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.26■□□□□ 0.83
Setdb1O88974 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.26■□□□□ 0.83
Setdb1O88974 Gm44450-201ENSMUST00000199528 114 ntBASIC20.26■□□□□ 0.83
Setdb1O88974 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Setdb1O88974 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Setdb1O88974 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Setdb1O88974 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.25■□□□□ 0.83
Setdb1O88974 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.25■□□□□ 0.83
Setdb1O88974 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Setdb1O88974 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Setdb1O88974 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.25■□□□□ 0.83
Setdb1O88974 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.25■□□□□ 0.83
Setdb1O88974 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Setdb1O88974 Mir5126-201ENSMUST00000175513 77 ntBASIC20.25■□□□□ 0.83
Setdb1O88974 Auts2-212ENSMUST00000178555 309 ntBASIC20.25■□□□□ 0.83
Setdb1O88974 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.25■□□□□ 0.83
Setdb1O88974 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Setdb1O88974 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.24■□□□□ 0.83
Setdb1O88974 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.24■□□□□ 0.83
Setdb1O88974 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Setdb1O88974 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.24■□□□□ 0.83
Setdb1O88974 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Setdb1O88974 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.24■□□□□ 0.83
Setdb1O88974 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Setdb1O88974 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Setdb1O88974 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.23■□□□□ 0.83
Setdb1O88974 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Gm15467-201ENSMUST00000120582 445 ntBASIC20.23■□□□□ 0.83
Setdb1O88974 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.23■□□□□ 0.83
Setdb1O88974 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Setdb1O88974 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Setdb1O88974 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.22■□□□□ 0.83
Setdb1O88974 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.22■□□□□ 0.83
Setdb1O88974 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Setdb1O88974 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.22■□□□□ 0.83
Setdb1O88974 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Setdb1O88974 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Setdb1O88974 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Setdb1O88974 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Setdb1O88974 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Setdb1O88974 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Setdb1O88974 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Setdb1O88974 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms