Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Best1O88870 Gm12895-201ENSMUST00000122214 226 ntBASIC15.97■□□□□ 0.15
Best1O88870 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Best1O88870 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Gm36967-201ENSMUST00000193814 266 ntBASIC15.97■□□□□ 0.15
Best1O88870 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.97■□□□□ 0.15
Best1O88870 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Best1O88870 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.97■□□□□ 0.15
Best1O88870 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Best1O88870 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.96■□□□□ 0.15
Best1O88870 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.96■□□□□ 0.15
Best1O88870 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.96■□□□□ 0.15
Best1O88870 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.96■□□□□ 0.15
Best1O88870 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.96■□□□□ 0.15
Best1O88870 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Best1O88870 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
Best1O88870 Gm27741-201ENSMUST00000185060 237 ntBASIC15.96■□□□□ 0.15
Best1O88870 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Best1O88870 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Best1O88870 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Best1O88870 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.96■□□□□ 0.15
Best1O88870 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Best1O88870 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Best1O88870 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Best1O88870 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Gm7153-201ENSMUST00000117092 455 ntBASIC15.95■□□□□ 0.14
Best1O88870 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.95■□□□□ 0.14
Best1O88870 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Best1O88870 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Best1O88870 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Best1O88870 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.94■□□□□ 0.14
Best1O88870 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.94■□□□□ 0.14
Best1O88870 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.94■□□□□ 0.14
Best1O88870 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.94■□□□□ 0.14
Best1O88870 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Best1O88870 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.94■□□□□ 0.14
Best1O88870 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Best1O88870 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Best1O88870 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Best1O88870 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.93■□□□□ 0.14
Best1O88870 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.93■□□□□ 0.14
Best1O88870 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.93■□□□□ 0.14
Best1O88870 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Birc2-201ENSMUST00000054878 378 ntBASIC15.93■□□□□ 0.14
Best1O88870 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.93■□□□□ 0.14
Best1O88870 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms