Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.2■□□□□ 0.18
ClppO88696 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.2■□□□□ 0.18
ClppO88696 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.2■□□□□ 0.18
ClppO88696 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ClppO88696 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ClppO88696 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ClppO88696 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ClppO88696 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.19■□□□□ 0.18
ClppO88696 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ClppO88696 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ClppO88696 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.19■□□□□ 0.18
ClppO88696 Gm26039-201ENSMUST00000158152 144 ntBASIC16.19■□□□□ 0.18
ClppO88696 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.19■□□□□ 0.18
ClppO88696 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ClppO88696 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.19■□□□□ 0.18
ClppO88696 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ClppO88696 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.18■□□□□ 0.18
ClppO88696 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ClppO88696 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ClppO88696 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Idnk-204ENSMUST00000226010 1898 ntBASIC16.18■□□□□ 0.18
ClppO88696 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ClppO88696 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ClppO88696 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.17■□□□□ 0.18
ClppO88696 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Gm7284-201ENSMUST00000131667 944 ntBASIC16.17■□□□□ 0.18
ClppO88696 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.17■□□□□ 0.18
ClppO88696 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ClppO88696 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ClppO88696 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ClppO88696 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClppO88696 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClppO88696 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClppO88696 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClppO88696 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ClppO88696 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms