Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Slc28a2O88627 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.82□□□□□ -0.04
Slc28a2O88627 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.82□□□□□ -0.04
Slc28a2O88627 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Slc28a2O88627 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.82□□□□□ -0.04
Slc28a2O88627 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc28a2O88627 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Slc28a2O88627 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc28a2O88627 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc28a2O88627 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Slc28a2O88627 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Slc28a2O88627 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc28a2O88627 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc28a2O88627 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Slc28a2O88627 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc28a2O88627 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.79□□□□□ -0.04
Slc28a2O88627 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Slc28a2O88627 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc28a2O88627 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc28a2O88627 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.78□□□□□ -0.04
Slc28a2O88627 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc28a2O88627 Gm27011-201ENSMUST00000182352 972 ntBASIC14.78□□□□□ -0.04
Slc28a2O88627 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms