Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.27■□□□□ 0.84
Cops6O88545 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cops6O88545 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.27■□□□□ 0.84
Cops6O88545 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.27■□□□□ 0.84
Cops6O88545 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.27■□□□□ 0.84
Cops6O88545 Gm6443-201ENSMUST00000203599 874 ntBASIC20.27■□□□□ 0.84
Cops6O88545 Gm6296-201ENSMUST00000222599 943 ntBASIC20.27■□□□□ 0.84
Cops6O88545 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cops6O88545 Rps4l-201ENSMUST00000071745 943 ntBASIC20.27■□□□□ 0.84
Cops6O88545 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.27■□□□□ 0.84
Cops6O88545 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Cops6O88545 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cops6O88545 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cops6O88545 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cops6O88545 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.27■□□□□ 0.83
Cops6O88545 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.27■□□□□ 0.83
Cops6O88545 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.26■□□□□ 0.83
Cops6O88545 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.26■□□□□ 0.83
Cops6O88545 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.26■□□□□ 0.83
Cops6O88545 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cops6O88545 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cops6O88545 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Cops6O88545 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cops6O88545 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.25■□□□□ 0.83
Cops6O88545 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.25■□□□□ 0.83
Cops6O88545 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.25■□□□□ 0.83
Cops6O88545 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.25■□□□□ 0.83
Cops6O88545 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cops6O88545 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.25■□□□□ 0.83
Cops6O88545 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cops6O88545 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.24■□□□□ 0.83
Cops6O88545 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Gm43514-201ENSMUST00000198852 424 ntBASIC20.24■□□□□ 0.83
Cops6O88545 Gm18195-201ENSMUST00000207604 706 ntBASIC20.24■□□□□ 0.83
Cops6O88545 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cops6O88545 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cops6O88545 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cops6O88545 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cops6O88545 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.23■□□□□ 0.83
Cops6O88545 Gm18733-201ENSMUST00000173950 856 ntBASIC20.23■□□□□ 0.83
Cops6O88545 AW822252-206ENSMUST00000208904 237 ntBASIC20.23■□□□□ 0.83
Cops6O88545 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cops6O88545 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cops6O88545 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cops6O88545 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cops6O88545 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Gm44357-201ENSMUST00000195897 142 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm19658-201ENSMUST00000196231 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44367-201ENSMUST00000196836 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44350-201ENSMUST00000197197 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44390-201ENSMUST00000197533 144 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44313-201ENSMUST00000198018 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44486-201ENSMUST00000198508 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44314-201ENSMUST00000199263 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44394-201ENSMUST00000199558 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44484-201ENSMUST00000199873 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm44466-201ENSMUST00000200264 138 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms