Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.61■□□□□ 0.73
Slc4a4O88343 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc4a4O88343 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc4a4O88343 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc4a4O88343 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc4a4O88343 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc4a4O88343 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc4a4O88343 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Slc4a4O88343 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Slc4a4O88343 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.6■□□□□ 0.73
Slc4a4O88343 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.6■□□□□ 0.73
Slc4a4O88343 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.6■□□□□ 0.73
Slc4a4O88343 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Slc4a4O88343 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Slc4a4O88343 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc4a4O88343 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slc4a4O88343 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Gm9103-201ENSMUST00000119371 405 ntBASIC19.59■□□□□ 0.73
Slc4a4O88343 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.59■□□□□ 0.73
Slc4a4O88343 Gm17807-201ENSMUST00000186869 298 ntBASIC19.59■□□□□ 0.73
Slc4a4O88343 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Slc4a4O88343 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Slc4a4O88343 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc4a4O88343 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc4a4O88343 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc4a4O88343 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.58■□□□□ 0.73
Slc4a4O88343 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc4a4O88343 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Slc4a4O88343 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.58■□□□□ 0.72
Slc4a4O88343 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.58■□□□□ 0.72
Slc4a4O88343 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc4a4O88343 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.57■□□□□ 0.72
Slc4a4O88343 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Slc4a4O88343 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc4a4O88343 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms