Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.01□□□□□ -0.17
Ccr6O54689 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccr6O54689 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccr6O54689 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14□□□□□ -0.17
Ccr6O54689 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14□□□□□ -0.17
Ccr6O54689 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccr6O54689 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccr6O54689 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccr6O54689 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccr6O54689 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccr6O54689 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.99□□□□□ -0.17
Ccr6O54689 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccr6O54689 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Gm7514-201ENSMUST00000209475 934 ntBASIC13.99□□□□□ -0.17
Ccr6O54689 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.99□□□□□ -0.17
Ccr6O54689 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccr6O54689 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccr6O54689 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Ccr6O54689 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Gm11927-201ENSMUST00000118472 759 ntBASIC13.98□□□□□ -0.17
Ccr6O54689 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccr6O54689 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Gm7291-201ENSMUST00000199147 382 ntBASIC13.98□□□□□ -0.17
Ccr6O54689 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.98□□□□□ -0.17
Ccr6O54689 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccr6O54689 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ccr6O54689 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Ccr6O54689 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccr6O54689 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccr6O54689 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms