Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.18■□□□□ 0.5
Sptlc1O35704 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sptlc1O35704 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sptlc1O35704 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.17■□□□□ 0.5
Sptlc1O35704 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Sptlc1O35704 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
Sptlc1O35704 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sptlc1O35704 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.16■□□□□ 0.5
Sptlc1O35704 Gm11452-201ENSMUST00000122376 690 ntBASIC18.16■□□□□ 0.5
Sptlc1O35704 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.16■□□□□ 0.5
Sptlc1O35704 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sptlc1O35704 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Gm12644-201ENSMUST00000119935 606 ntBASIC18.15■□□□□ 0.5
Sptlc1O35704 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Gm10052-201ENSMUST00000168019 960 ntBASIC18.15■□□□□ 0.5
Sptlc1O35704 Gm44430-201ENSMUST00000203376 995 ntBASIC18.15■□□□□ 0.5
Sptlc1O35704 Gm7729-201ENSMUST00000050143 801 ntBASIC18.15■□□□□ 0.5
Sptlc1O35704 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sptlc1O35704 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
Sptlc1O35704 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sptlc1O35704 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sptlc1O35704 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Rprl3-201ENSMUST00000157400 290 ntBASIC18.14■□□□□ 0.49
Sptlc1O35704 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Sptlc1O35704 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sptlc1O35704 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sptlc1O35704 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.13■□□□□ 0.49
Sptlc1O35704 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sptlc1O35704 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sptlc1O35704 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.13■□□□□ 0.49
Sptlc1O35704 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sptlc1O35704 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms