Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.87■□□□□ 0.45
Nr1i3O35627 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Nr1i3O35627 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nr1i3O35627 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.86■□□□□ 0.45
Nr1i3O35627 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.86■□□□□ 0.45
Nr1i3O35627 Gm18115-201ENSMUST00000221209 621 ntBASIC17.86■□□□□ 0.45
Nr1i3O35627 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nr1i3O35627 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nr1i3O35627 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1i3O35627 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nr1i3O35627 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nr1i3O35627 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Dancr-204ENSMUST00000132389 2347 ntBASIC17.85■□□□□ 0.45
Nr1i3O35627 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.85■□□□□ 0.45
Nr1i3O35627 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.85■□□□□ 0.45
Nr1i3O35627 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.85■□□□□ 0.45
Nr1i3O35627 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.85■□□□□ 0.45
Nr1i3O35627 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nr1i3O35627 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nr1i3O35627 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1i3O35627 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nr1i3O35627 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.84■□□□□ 0.45
Nr1i3O35627 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Gm11539-201ENSMUST00000119837 557 ntBASIC17.84■□□□□ 0.45
Nr1i3O35627 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.84■□□□□ 0.45
Nr1i3O35627 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.84■□□□□ 0.45
Nr1i3O35627 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nr1i3O35627 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1i3O35627 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1i3O35627 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.83■□□□□ 0.45
Nr1i3O35627 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1i3O35627 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1i3O35627 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Nr1i3O35627 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.83■□□□□ 0.44
Nr1i3O35627 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.83■□□□□ 0.44
Nr1i3O35627 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.83■□□□□ 0.44
Nr1i3O35627 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1i3O35627 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nr1i3O35627 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms