Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.41■□□□□ 0.06
Capn1O35350 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Capn1O35350 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Capn1O35350 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Capn1O35350 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Capn1O35350 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Capn1O35350 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Capn1O35350 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.4■□□□□ 0.06
Capn1O35350 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.4■□□□□ 0.06
Capn1O35350 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Gm9103-201ENSMUST00000119371 405 ntBASIC15.4■□□□□ 0.06
Capn1O35350 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.4■□□□□ 0.06
Capn1O35350 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.4■□□□□ 0.06
Capn1O35350 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.4■□□□□ 0.06
Capn1O35350 Gm10566-201ENSMUST00000086739 996 ntBASIC15.4■□□□□ 0.06
Capn1O35350 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Capn1O35350 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.4■□□□□ 0.06
Capn1O35350 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.4■□□□□ 0.06
Capn1O35350 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Capn1O35350 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.4■□□□□ 0.06
Capn1O35350 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Capn1O35350 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Capn1O35350 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Gm27704-201ENSMUST00000185094 107 ntBASIC15.39■□□□□ 0.05
Capn1O35350 Gm29518-201ENSMUST00000190858 372 ntBASIC15.39■□□□□ 0.05
Capn1O35350 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.39■□□□□ 0.05
Capn1O35350 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Capn1O35350 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.39■□□□□ 0.05
Capn1O35350 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Capn1O35350 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Capn1O35350 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Capn1O35350 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.38■□□□□ 0.05
Capn1O35350 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.38■□□□□ 0.05
Capn1O35350 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.38■□□□□ 0.05
Capn1O35350 Gm11355-201ENSMUST00000121120 306 ntBASIC15.38■□□□□ 0.05
Capn1O35350 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.38■□□□□ 0.05
Capn1O35350 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Capn1O35350 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.37■□□□□ 0.05
Capn1O35350 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Capn1O35350 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Capn1O35350 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Capn1O35350 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.37■□□□□ 0.05
Capn1O35350 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Capn1O35350 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Capn1O35350 Gm26039-201ENSMUST00000158152 144 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms