Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Mir5122-201ENSMUST00000175004 89 ntBASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Tnfrsf11bO08712 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfrsf11bO08712 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfrsf11bO08712 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Gm22240-201ENSMUST00000175225 82 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Gm10812-201ENSMUST00000099864 546 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfrsf11bO08712 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gm27463-201ENSMUST00000183569 57 ntBASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf11bO08712 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf11bO08712 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms