Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Gm12441-201ENSMUST00000121806 588 ntBASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Gm9731-201ENSMUST00000209480 747 ntBASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C530025M09RikF6RGA8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm12527-201ENSMUST00000117967 564 ntBASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm12085-201ENSMUST00000119263 940 ntBASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Trmt13-210ENSMUST00000198454 880 ntBASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C530025M09RikF6RGA8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Gm7638-201ENSMUST00000121348 967 ntBASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Gm10698-201ENSMUST00000182663 604 ntBASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C530025M09RikF6RGA8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms