Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gm45384-201ENSMUST00000210451 277 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gm7774-201ENSMUST00000200064 533 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm15236-201ENSMUST00000117309 379 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm38308-201ENSMUST00000194934 1809 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm5177-201ENSMUST00000183092 997 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Nudt18-203ENSMUST00000228768 1578 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC9.31□□□□□ -0.92
Herc1E9PZP8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc1E9PZP8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Gm43125-201ENSMUST00000201724 730 ntBASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.3□□□□□ -0.92
Herc1E9PZP8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.3□□□□□ -0.92
Herc1E9PZP8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.3□□□□□ -0.92
Herc1E9PZP8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms