Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hfm1D3Z4R1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Gm5682-201ENSMUST00000173402 505 ntBASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Gm11873-201ENSMUST00000117877 1304 ntBASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Hfm1D3Z4R1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Gm4913-201ENSMUST00000117075 1290 ntBASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Gm15920-201ENSMUST00000118998 402 ntBASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Gm36967-201ENSMUST00000193814 266 ntBASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Hfm1D3Z4R1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Gm27646-201ENSMUST00000183989 110 ntBASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Gm44945-201ENSMUST00000206764 1187 ntBASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Gm15500-202ENSMUST00000071641 1019 ntBASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Hfm1D3Z4R1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Gm8969-201ENSMUST00000199694 526 ntBASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 AC174742.1-201ENSMUST00000218272 304 ntBASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hfm1D3Z4R1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC23.24■■□□□ 1.31
Hfm1D3Z4R1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms