Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim30cD3YVI9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Odf3b-204ENSMUST00000227834 930 ntBASIC18.2■□□□□ 0.5
Trim30cD3YVI9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.2■□□□□ 0.5
Trim30cD3YVI9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim30cD3YVI9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim30cD3YVI9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim30cD3YVI9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms