Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Mir770-201ENSMUST00000103252 94 ntBASIC19.46■□□□□ 0.71
Usp42B2RQC2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.45■□□□□ 0.7
Usp42B2RQC2 Gm6345-202ENSMUST00000180900 204 ntBASIC19.45■□□□□ 0.7
Usp42B2RQC2 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.45■□□□□ 0.7
Usp42B2RQC2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp42B2RQC2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp42B2RQC2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.43■□□□□ 0.7
Usp42B2RQC2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 AA414768-201ENSMUST00000121924 1257 ntBASIC19.43■□□□□ 0.7
Usp42B2RQC2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp42B2RQC2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp42B2RQC2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms