Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.08■□□□□ 0.32
Col4a6B1AVK5 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Gm27646-201ENSMUST00000183989 110 ntBASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Gm27397-201ENSMUST00000184997 107 ntBASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Mir6404-201ENSMUST00000183699 94 ntBASIC17.07■□□□□ 0.32
Col4a6B1AVK5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a6B1AVK5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col4a6B1AVK5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col4a6B1AVK5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a6B1AVK5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col4a6B1AVK5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms