Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Gm9731-201ENSMUST00000209480 747 ntBASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-1A0N8R0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav12d-1A0N8R0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav12d-1A0N8R0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Gm43183-201ENSMUST00000200632 547 ntBASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-1A0N8R0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Gm27275-201ENSMUST00000184318 272 ntBASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-1A0N8R0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms