Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Gm17661-201ENSMUST00000170317 270 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Gm21814-202ENSMUST00000203277 873 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Gm7791-201ENSMUST00000219066 539 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trbv17A0A140T8P8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm18958-201ENSMUST00000174258 762 ntBASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trbv17A0A140T8P8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv17A0A140T8P8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms