Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav13n-4A0A0G2JG01 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav13n-4A0A0G2JG01 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-4A0A0G2JG01 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-4A0A0G2JG01 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav13n-4A0A0G2JG01 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13n-4A0A0G2JG01 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm10517-202ENSMUST00000192970 758 ntBASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 AA414768-201ENSMUST00000121924 1257 ntBASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-4A0A0G2JG01 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Mir5130-201ENSMUST00000175160 84 ntBASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm45058-201ENSMUST00000205810 766 ntBASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav13n-4A0A0G2JG01 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms