Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Dancr-204ENSMUST00000132389 2347 ntBASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms