Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav4-2A0A075B638 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gm10033-202ENSMUST00000211874 928 ntBASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4-2A0A075B638 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Gm15375-201ENSMUST00000119510 849 ntBASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mtag2-201ENSMUST00000058665 714 ntBASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav4-2A0A075B638 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4-2A0A075B638 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-2A0A075B638 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-2A0A075B638 Asic1-205ENSMUST00000228185 1818 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms