Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv4A0A075B5I2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv4A0A075B5I2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv4A0A075B5I2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Gm10252-201ENSMUST00000209541 832 ntBASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv4A0A075B5I2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv4A0A075B5I2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trbv4A0A075B5I2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms